TTGCTGTTGG CGCTCTTTGC CTCCGGCCTC ATCCACCGAG TTTGTGTCAC CACTTGGTAC GTATCTGACA GCTGGGCAAG CGGTGCAACA ACACCATGTC TTGTGGGACC AGATCTTCCT ATGGTGTTAA TAGTCCCTTC CCTTCCCACC ATATGCCACC TCCTCTGTCC CCTCCCCCCC ATTATTTTTT TCAAAGCTTT W TTTATTTATT ATATGTAACT ACACTGTAGC TGTCTTCAGA CACACCAGAA GAGGGCATCA GATCTCATTA CGGATGGTTG TGAGCCACCA TGTGGTTGCT GGGATTTGAA CTCGGGACCT ATGGAAGAGC AGTCAGTGCT CTTAACCCCT GAGCCATCTC CCCACCCCCA CCCCTTTTTT TTGTCCTTAG TTTCCCAGGC W = A/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
MSM/Ms |
---|---|---|---|---|---|---|---|---|---|
ss135474299 | ENSMUSSNP5976121 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | T | T | A |
SNP Consensus Information | |||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
MSM/Ms |
||||
rs46984208 | SNP | T | T | T | A |
Location: Chr3:89156592 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Krtcap2 | keratinocyte associated protein 2 | Intron | ||||||
Rr580001 | regulatory region 580001 | 968 bp proximal | ||||||
Rr580002 | regulatory region 580002 | 1049 bp proximal | ||||||
Rr580003 | regulatory region 580003 | 1266 bp proximal | ||||||
Rr580004 | regulatory region 580004 | 1310 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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