rs46981077 SNP Detail

Summary

• ID
  rs46981077
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:57042840 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAATAGG AACTCTGGTA
  ATTCAGAAGT GCAAATGGTT AAAGACCTTC TCTCTAGCTC CAAAAAGAGC ATCCACCATT
  GTGAAAATGA TAATTATCAA ATAATCATAT ATAAAAATAT AGAAATTATA TTCAAAGATG
  TCAAACAATA GCTCACCCCA CAAATTGTAT CACTTCTCTT CTAAATTGCT CTTTGTTTTT
  R
  GTGTGCACCA GTGACTCCAA AGACAACTGC TAGTCCATTT GTTTAATTCT GTTGCACAGA
  GTTTAAGGCT AGATTTTGAA GAGAGTTCGC CTGACTCTTC CGAAGTTCCC ATTCTGTTCC
  ATCTGTAAAA TGGGAGCCTC CTTTGGAAGA TAAGTTTGTT CCTGGTGCCC TGTTACTGTT
  GGGTTATGCC GTTCAGAAAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss135198857	ENSMUSSNP3894401	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46981077					SNP	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:57042840 () rs orientation: forward

Symbol	Name	Function Class
Gm8177	predicted gene 8177	75 bp downstream
Gm64707	predicted gene, 64707	1658 bp upstream
Rr375016	regulatory region 375016	939 bp upstream
Rr577070	regulatory region 577070	1367 bp proximal
Rr577071	regulatory region 577071	1669 bp proximal