rs46978773 SNP Detail

Summary

• ID
  rs46978773
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr14:70010887 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGCCCACA GCCAATCTGA
  TGCAGGCAGT CCCTCAGTTG TGATAGCCAT TTCCCAAGTA TGTCTAACTA GGGCACGCGT
  CTTCACCACA GCTCTGGGAA TCCCGAAGTT TGCTTAATCA GTTTTCTTTC CATCCTCAGG
  CCAGTACCTG TCAGAAGGGA ACTGCAAGCC TTGCAGAGAG GGTATTGACT ACACCAGCCA
  T
  TCCAACCATT CTCTGGATTC ATGTATTCTC TGCACAGTCT GTAAGGAAGG TACAGAGCAA
  AGGGGCCCTT CCCACAGGAG GAGCATGGGC AGGGGGATTC ATAACTGCAG TGAACTGGAA
  AACTTCAGTT CCAGCCATCT TGATCTTCAT TTTTCCCTGT TCTCCGCCTG TCTTTAGTTC
  AATGGGACAA AACCACAAGT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss139676599	ENSMUSSNP1525787	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	A/J
rs46978773					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70010887 () rs orientation: forward

Symbol	Name	Function Class
Rr494754	regulatory region 494754	591 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	Coding-NonSynonymous
Tssr126377	transcription start site region 126377	1670 bp upstream
Tssr126378	transcription start site region 126378	1719 bp upstream