rs46977362 SNP Detail

Summary

• ID
  rs46977362
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:127684942 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCACATTA TGAATCCATC
  TGGGTGAGAG CTTTATGATC TACCTCTAAC CTTCTGTGAC CTTGCAGACT ACCCAGAGGT
  ATGTTTTACC AGTGTTCTAG GCATTCCCCT TTAAACAGAG TCTCACTCAC ACACAGTCTA
  AACTGACCTT GAACTCACTG TGTAGCCCGG GCTAGCATGA CAAATGTGCA CTACAGAACC
  T
  AGTTTTCTCT CTTTCTTGAT CCAGTCATGT TGCCAGTCAC AACCACTCAT TCCAAGGGGA
  CTGTTTTCTA CATTATAGGC TGTTTAGCAG TACTCCTGGA CACTTTGATG CCTGGTAGCA
  CCAACTACCC CATGTATCAA CAATCAAAGG TGTTATTAAC ACAGTGTCAC ATGGATCCTA
  ACACAAGACT GTCTTCAGTT                                            
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss135874340	ENSMUSSNP1035289	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46977362					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127684942 () rs orientation: forward

Symbol	Name	Function Class
Fam241a	family with sequence similarity 241, member A	Intron
Rr584892	regulatory region 584892	1369 bp distal
Rr584893	regulatory region 584893	972 bp distal
Rr584894	regulatory region 584894	within coordinates