rs46967490 SNP Detail

Summary

• ID
  rs46967490
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:57520532 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTGATTTA AGCAGTGGTT
  TCACATCAGG GTACTGGACT TTTACCTTTC ACACACCTAA TATAACTTTC TGATACTCTT
  ATTACTTGCT TTATAGCTTT CTTGTTCACC TTAGAAAAAT ATCCAAAATG GATGTATCTG
  GAGGATATCA TCCTTAGTGA GGTAACCCAA TCACAAAAGA ACACACATGA TAAGCACTCA
  A
  TGATAAGTGG ATATTAACCC AGAAACTTAG AATACCCAAG ATACAATTTG CAAAACACAT
  GAAACTCAAG AAGAAGGAAG ACAAAAGTGT GGATACTTCA TTTCTTCTTA GAATGGGGAA
  CAAAATACCC ATGGAAGGAG TTACAGAGAC AAAGTTCAGA GCAGAGCCTG GCAGAATGAC
  TATTCAGAGA CTGCCCCACT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133241519	ENSMUSSNP6453801	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46967490					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:57520532 () rs orientation: forward

Symbol	Name	Function Class
Gm45193	predicted gene 45193	within coordinates
Gm66279	predicted gene, 66279	within coordinates
Rr379418	regulatory region 379418	1223 bp downstream
Rr631144	regulatory region 631144	116 bp proximal
Rr631145	regulatory region 631145	1097 bp proximal