rs46967026 SNP Detail

Summary

• ID
  rs46967026
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:116014793 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGCACCTT GGCATTTGCT
  TTGATAATCG AACACCCCTT CAGGGTGTGA GCAAATGTCC TCTGTCTTTA TGATATTCTA
  TTGCTCATAG CTTTCTGGAT ACATCCACAT GCACAGACCT CATATCACCA CCCTCTCTGA
  AGAGGCATCA GGTTCAAAAC TGACAAGACT TGTATTGATA TGTAAACACC AGGTCGTGTT
  R
  GTGTGTCTGA CTGATGGGGA CTTGGCAGCT GAGACAGACC ACTGCATGAA CTGTGTCATC
  ACAACAGAAA CCAGGCCAAG CCAAAACCTA AAGCAGGATG CATTTGCCAA AAATAAGATG
  CATTCCTAGC TGGACAGTGG TTAGAAACGG GCTCGAGCTG CATAGACATA AAACACTGGC
  TGCTTGTTTG TTTACACCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss60437889	NES15932710	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	FVB/NJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs46967026					SNP	A	A	A	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60437889	NES15932710	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:116014793 () rs orientation: forward

Symbol	Name	Function Class
Rr583673	regulatory region 583673	within coordinates
Rr583674	regulatory region 583674	1367 bp proximal