rs46960458 SNP Detail

Summary

• ID
  rs46960458
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150299182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GACCA GGCTGGCCTC AAACTCAGAA
  A
  TCTGCCTGCC TCTGCCTCCC AAGTG                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss148050344	ENSMUSSNP4746615	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	A
ss321428664	CHEV_4_149588834	CHEVERUD	SCREENING_POP	f	SNP				A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46960458					SNP	A	A	A	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150299182 () rs orientation: forward

Symbol	Name	Function Class
Rr605224	regulatory region 605224	1592 bp distal
Rr605225	regulatory region 605225	855 bp distal
Rr605226	regulatory region 605226	539 bp distal
Rr605227	regulatory region 605227	598 bp distal