rs46958584 SNP Detail

Summary

• ID
  rs46958584
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:60958858 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGGGTCTCT AAGAAATGAC
  TACATTGAAT TCCTATCCCC AATACTGTTA GAGATTTGGG AGCTGATTAG TTCACGTAGT
  GGCTGTTCCT GGTTGTCAAC TTGACTATAT CTGGAATGAA CTACAATCCA GAATTGGAAG
  GCTCACCTGT GATCCAGATC TTGAGGCTGG GAGAAATAAG TTTCTGACAT GGATTTTGGC
  M
  TGGAGATTTT GAGGCATAGT GGCTATGAGT CCCAGGAATC CAAGGCAAGG AGAGCTGAGT
  TTAAGGTCAT CTGGGAAAAA GCAAGTCAGA TCCAGGCATG GCAGCACACA CCTTTAATCT
  GATCCACACC TTCTGCTGGA GAACTACAGA AGGACATTGG AAGAAGGAAG ACTCTCTCTT
  CTTTACCTGC TTGCTTTGTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	MSM/Ms
ss135222416	ENSMUSSNP1609568	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	A/J	MSM/Ms
rs46958584					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:60958858 () rs orientation: forward

Symbol	Name	Function Class
Rr577470	regulatory region 577470	807 bp distal