rs46948005 SNP Detail

Summary

• ID
  rs46948005
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:185245344 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCTATCAATC CATTTCTATG TACTTATCAT CTGTCTATAT
  GTTTTGGGAA ATATTAAAAA AGTGAAACCG CACGTTCCTG CGCTTGTGCC TGCACAGTGT
  K
  TTCTCGCTGG GCTACTTTTT CGAGCTTGCC CCAGCTTGCC CGATTGCTGT ATTTCTAGCT
  CTCATTCGCT TGTCCCTGGA GCCGCTAGTT CCCTCTCTA                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss146434869	ENSMUSSNP166734	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T	G
ss320176763	CHEV_1_187337026	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46948005					SNP	G	T	G	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:185245344 () rs orientation: forward

Symbol	Name	Function Class
Rr425406	regulatory region 425406	1792 bp proximal