rs46944504 SNP Detail

Summary

• ID
  rs46944504
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116689210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AAGCC AATGGTTGTC CCTGTTCTGT
  S
  GACAGGAAAC TGAAGCTTAA GTAGT                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss133578845	ENSMUSSNP5986990	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G
ss321918789	CHEV_6_116662267	CHEVERUD	SCREENING_POP	f	SNP			C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46944504					SNP	C	G	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116689210 () rs orientation: forward

Symbol	Name	Function Class
Rr637245	regulatory region 637245	36 bp proximal
Rr637246	regulatory region 637246	313 bp proximal
Tmem72	transmembrane protein 72	Intron