rs46914157 SNP Detail

Summary

• ID
  rs46914157
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:34502619 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACAAACACAT GCCACAATAC
  TTGGGGAGTT TGTGTTTTGT TTTGTTTTGT TTTGTTTTGT TGTTTTGTTT TGTCTTGTTT
  TGATAACATG GATTTAGATC AAACTCAAGT CCTCATGCCT ACATTCGCCA AGTAGACATC
  TTTCCAAATC CCTGGTCTTG ACTTTGGTTG TTTAGTTTTC CAGTGTTTGG ACCTTAAGTA
  R
  CATAGTCCTC ATCAAACCAC TGCAACTTAC TTGCAGACAA ATTCTATCCT CCTTTAGTCT
  GTTTTCCTGC TATGACTACA ATAAACTCCC ACAATTTAGT ATCATAAAAA ACAAAACAAA
  ACTAAGCCAC AGTGGTGTAT GTCTGTGGTC CTACTCCAGA AGAGACTGAG ACAAGACAAT
  CACTGGATAG CAGCTATTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
ss60386485	NES15889299	PERLEGEN	MM_PANEL2	f	SNP	G	G	A	G	G	G	G	G	G	A		G	G	G		G
ss320701789	CHEV_3_34347392	CHEVERUD	SCREENING_POP	f	SNP											G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	SM/J	WSB/EiJ
rs46914157					SNP	G	G	A	G	G	G	G	G	G	A	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss60386485	NES15889299	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:34502619 () rs orientation: forward

Symbol	Name	Function Class
Gm64637	predicted gene, 64637	within coordinates
Gm64638	predicted gene, 64638	1860 bp upstream
Rr575135	regulatory region 575135	1664 bp distal