rs46907798 SNP Detail

Summary

• ID
  rs46907798
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:7559250 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGAGGATT GATATTCACT
  CTTCTTTAAA AGTTTAGTAG AATTCTACAC TAAAATGATC TGGCTTTAGG CTTTATTTCT
  ATTTTGGGGT GGTGGTAGAG AGGACAGGCT TCTATTCCAC TAGGGGCTAT ATGTATGTTT
  ATATACCTTA TCTGATTTTG ATTTAACTTT TGTAAGTGGT ACGTATTGAA AAATTACCCA
  Y
  TTCTTTTTGT TTTCCTCATT TGTTGGAATA CAGGTTTTTA TAAGTATGCC CTTATGATTC
  TTTTGATTTC TTTGGTGTCT ATTGTTACAC TTCTTTTTTT TTTATTACTA ATTTCACTAA
  TTTGGAAATT TTCTCTCTTT TTTAAATTAA ATTTGGCAAA GGTTTGTCAA TTGTATTCAT
  TTCCTTAAAG AACCAACTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss134557390	ENSMUSSNP6904294	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46907798					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:7559250 () rs orientation: forward

Symbol	Name	Function Class
Gm66025	predicted gene, 66025	within coordinates
Rr573246	regulatory region 573246	1517 bp distal