rs46907006 SNP Detail

Summary

• ID
  rs46907006
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101260332 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGAAATAAA ACACATTTTT
  AGGTAGTTGG GTTCTACATC AAAGAATGCC ACTACATTAA TGTTAAATTT ATATTTTTAG
  AAGTATTCTT TCTTATTGGG TCCCTGGAGA GACAGTCCCA TGGTTAAGAG TGCCCACTGT
  TCTTCCAGAG CACTGAACTG AGAGTTGAGA AATGAGTCCA GAAGATGACA CAGAGGTGGC
  Y
  GCAGAAGCAC ATGGCTGGGA CAGGAGTTCA GTCACAGCCA GCATCCTACA GGACAAAGGC
  CTCGTGCTGA TCACTGGTAG GACAAACTCA CAACCTCCTG TAACTCCAGC TCATGGCATC
  CAGCGCCCTG TCTGGCCTCT GGGTACCTGA AGGCACATGG CATACAAACA TACATACATA
  CACATCAATA AAAATATTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss135546688	ENSMUSSNP5567137	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46907006					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101260332 () rs orientation: forward

Symbol	Name	Function Class
Gm32900	predicted gene, 32900	within coordinates
Rr582016	regulatory region 582016	1932 bp distal
Rr582017	regulatory region 582017	1202 bp proximal
Rr582018	regulatory region 582018	1440 bp proximal