rs46903959 SNP Detail

Summary

• ID
  rs46903959
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:142440426 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGTAGGTC TCTGCCTTAG
  GAATATGGCT GAGCCAGTAT GCAAAGACAA ACCCATCTCA TCTCTGGATG AGGACAGAGC
  TGGGACTAGG GCAAACAGAG GGAGGCCTCA GGTACTAAAA CCCTCGACGG TTAAGATAAA
  TAGATTTGAA TGCAATGTTC TAAAAAATAA AATAAAATTT TAAGTATGTA CTCTGTACCC
  Y
  ACATTGCCTA GTTTCCTCTA AGCACACTCA GCCCTCAGGT ACAAGATAAA TACATTCTGG
  ACATCTAGTG TGCAGCACAA TCTCTCTAGC TAGGAATGAT ATAGACTGGA AACTCTCAAA
  AGAATGAACT CATGAATCTT CTCCCACCAC TGAGTCCTTA CAAACCCCCA ACACCTCACA
  CACACACATG CGTTAGCTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss147736787	ENSMUSSNP6889323	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C	T
ss320531953	CHEV_2_142424242	CHEVERUD	SCREENING_POP	f	SNP				T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46903959					SNP	T	C	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:142440426 () rs orientation: forward

Symbol	Name	Function Class
Rr566224	regulatory region 566224	606 bp proximal