rs46891333 SNP Detail

Summary

• ID
  rs46891333
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:33676576 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCTGAGTCC TAAGTCTGTG GCTCGAATTG CCAAGCTGGA
  AAAAGCAAAG GCTAAAGAAC TCGCCACTAA ATTGGGTTAA ATGTACACTG AGTTTTCTGT
  A
  CCTAAATATA ATTACAAAAT TAAAAAAAAA AAAGGAAGCA AATTCACCCA AGAGGAATAG
  ACGGCAGGAA ATAATCAAAC TCAGGGGTGA AATCAACCA                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134756759	ENSMUSSNP5989667	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs46891333					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:33676576 () rs orientation: forward

Symbol	Name	Function Class
Gm5845	predicted gene 5845	24 bp downstream
Tssr28780	transcription start site region 28780	837 bp downstream