rs46871871 SNP Detail

Summary

• ID
  rs46871871
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151794162 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCAGAACC CACAGAAAAC
  ACTGGATTCA GTCACACACC TCTGTAGTAC CTGCTCTCTC ACCGTGAGAC ACGAAGGTAC
  AGTCAGAGAA TCAGCCAGAA GCTCAAGGGC CAGCCAGCTT GAAGCACAGA GCACATCAGG
  AAAAGAGCAA CAGGAGACCC TGACTCGGAA CAGAGGCGAA GGCGAGGACC AACACGCCAC
  A
  GTTTTCCCTG ACGGCCACAT GCGTGCAGTG ACTCGTGACC ATGCAAACAC GCACATCATA
  CGCATGAACA CAAAACTAAT TATTCACTAA TTAACTAAAG GTGCCAAGGC TACATATGCT
  TCTAAGGAAA TAAAAACAAA TGAAAAATCT TGTCTATAAC AAATGTCATA TTTAACCACG
  GTTAACAGGA GCATCGGGAG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321027969	CHEV_3_151751489	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46871871					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151794162 () rs orientation: forward

Symbol	Name	Function Class
Gm31881	predicted gene, 31881	within coordinates
Rr587443	regulatory region 587443	633 bp proximal
Rr587444	regulatory region 587444	880 bp proximal