rs46871733 SNP Detail

Summary

• ID
  rs46871733
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:114441191 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATCTTTC CTTCTTCTGA
  TATCTCTGTG TCCCCTTTAA GAAATGGATT TCCAACGCCT CCATGTGACT ATTTTTTTTA
  TCCACAGCCT TAAGTAGGAC TATTCTTGGC TTAGAGCCTT AGTTCAAAGA CATAACACAT
  TCTCACATGT GTAAGCTAGG ATCTGAATCT GTTTCAACTA TACAGACTTT AATTTTATAC
  A
  TTTCTAGAGG CACATCCTGA ATCTAGCCCA GTAATCTAAG TTCATTCCTA CATATACCCT
  TGATTTCAAT CTCCAAGTTA AAGCAAGCAA TTTTGAAAGC CTTGGGCTTA TTCTACATCC
  TAATGTCAAT CAATCTGCCA GTGCACCTAA GGCTCCCAAA CAACTGTTTA CTGTTCAGTA
  CATTTTATTC AATAATAGTA                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ
ss138784409	ENSMUSSNP4203867	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ
rs46871733					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:114441191 () rs orientation: forward

Symbol	Name	Function Class
Igh	immunoglobulin heavy chain complex	within coordinates
Ighv10-1	immunoglobulin heavy variable 10-1	1436 bp downstream
Tssr3975	transcription start site region 3975	1920 bp downstream
Tssr118082	transcription start site region 118082	1935 bp downstream