rs46864622 SNP Detail

Summary

• ID
  rs46864622
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:137692324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAT GGATGGGCAC AAAAGCAGAA
  T
  CCCAAGCCCC GCCCCTCCAG AGATT                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss147627624	ENSMUSSNP2469670	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss321369380	CHEV_4_137520928	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46864622					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:137692324 () rs orientation: forward

Symbol	Name	Function Class
Ece1	endothelin converting enzyme 1	mRNA-UTR
Rr602798	regulatory region 602798	331 bp distal
Rr602799	regulatory region 602799	952 bp distal
Rr602800	regulatory region 602800	575 bp distal
Tssr39801	transcription start site region 39801	1175 bp downstream
Tssr39802	transcription start site region 39802	473 bp downstream