rs46859981 SNP Detail

Summary

• ID
  rs46859981
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:150297248 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGCAA ATTTATTTCC CAATCAGAGC
  T
  AACTGTGGGC AGGGACGCTC ACTCA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321428651	CHEV_4_149586900	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs46859981					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:150297248 () rs orientation: forward

Symbol	Name	Function Class
Rr605222	regulatory region 605222	863 bp distal
Rr605223	regulatory region 605223	666 bp distal
Rr605224	regulatory region 605224	within coordinates
Rr605225	regulatory region 605225	1058 bp proximal
Rr605226	regulatory region 605226	1221 bp proximal
Rr605227	regulatory region 605227	1315 bp proximal