rs46855874 SNP Detail

Summary

• ID
  rs46855874
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:143330805 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTAAATCCA TCCCTGCCAT CTATATAGAT GTCCATCTTT
  TTCAGTTTTT ACAGAAAGAT TTAACAGCTT ACTTATTTTA CCTTAAGGTC TTTAATGCAA
  T
  CTGAAATTTA CAATCAGATA GATTTTAGAA GAAGTCTAGA TATATGCCCA GGAGAGGTAT
  TGCGGGATCC TCTGGTAGTA CTATGTCCAA TTTTCTGAG                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss147760612	ENSMUSSNP4474551	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46855874					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:143330805 () rs orientation: forward

Symbol	Name	Function Class
Gm33599	predicted gene, 33599	1669 bp upstream
Rr566292	regulatory region 566292	1992 bp proximal