rs46837194 SNP Detail

Summary

• ID
  rs46837194
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151478207 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACTAGTTTG AAATATGCCC
  CTTGTGTTCC AAATGTTACA GTGAGCTTCA TCAAGGAACA TTTCTGATTC ATTAGAATAT
  TCACATGATT TCATAGGATA TTATCCTACA CTCTAAAGAT ATTAAAGATT TCACTAAGAT
  CTGATAAAGA CGTTCAACAA ATAGAAATGG GGCTTAGTTT GAAGCTCACC AAGCTTCAAA
  R
  ATATAACTAG AGACAGACCT ACAAGGGGGG GAAAGCTCAC TACTATGAAA ACTTTAAAAC
  ATTGAGGAAG AAACTGGATG GTCTCAGGTT CAGGGGTGGG GCTTGGGGGA GGGTAGAGTT
  AATATTAAGG AAAGGACTGT ATTACCAAGA AAGATCTGGG GCTTGTTGCA GTCTTCATCA
  AAATAACAAT GGTGCTCCTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J	LG/J	SM/J
ss136098053	ENSMUSSNP5593130	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A
ss321026850	CHEV_3_151435534	CHEVERUD	SCREENING_POP	f	SNP			G	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J	LG/J	SM/J
rs46837194					SNP	G	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151478207 () rs orientation: forward

Symbol	Name	Function Class
Rr587415	regulatory region 587415	1511 bp distal
Rr587416	regulatory region 587416	1184 bp distal
Rr587417	regulatory region 587417	1253 bp distal