rs46822278 SNP Detail

Summary

• ID
  rs46822278
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119541669 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGACAGGGTT TCTCTGTGTA GCCCTCGATG TCCTTGGAGC
  TCACTCTGTA GACCAGGCTG GCCTCGAACT CAGAAATCCT CCTGCCTCTG CCTCCCAAGT
  G
  CTGGGATTAA AGGCGTGTAC CACCACGCCC GGCTATTGTT TTGCTTTTCA AGGCAAGGTT
  TCTTTGTGTA GCCTTGGCTT CTCTGGAACT CACTCTGTA                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss133591013	ENSMUSSNP5988969	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46822278					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119541669 () rs orientation: forward

Symbol	Name	Function Class
Gm44317	predicted gene, 44317	1516 bp upstream
Rr637713	regulatory region 637713	1849 bp distal
Rr637714	regulatory region 637714	1030 bp distal
Rr637715	regulatory region 637715	812 bp proximal