rs46811487 SNP Detail

Summary

• ID
  rs46811487
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:82268454 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGGTAAGC CAGGTCAGAC
  CTGAGCTAGT TGCACAGTAC ATACAACTCC AAACATGCAC AGAATGCCTA TGCCACTGGG
  ACGTCAACAG GCAAGTGCTT AGTCAAGCGC TGGTTTTAGA GAGTGGCCAC TGTGTTATCA
  TGATGGTTCC CAGAACACAC AACTGTGATT AGAAATAAAG ATTTACACTC TTCTTCAGGA
  S
  CCAATGTAGA GCACCTATGA TTGCTGGGAG AGGAATAGTC ATTTTCTCCC TATTGGTTAC
  TTATCCATTC TCTAGCAAAT AACCATTGCT TCCTTAAACT TCCAAACAAA GATTTTCTGA
  TGATTGGTTC TTAACTAATG ATTTTTCTCT CTGACTTGCA TTTTACAATT TAATTATAAA
  ATCTATCATG CTTTCAACTA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	CAST/EiJ	KK/HlJ	PWD/PhJ	WSB/EiJ
ss61190090	NES16699835	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	G	C
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	CAST/EiJ	KK/HlJ	PWD/PhJ	WSB/EiJ
rs46811487					SNP	C	C	C	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss61190090	NES16699835	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:82268454 () rs orientation: forward

Symbol	Name	Function Class
1700008H02Rik	RIKEN cDNA 1700008H02 gene	within coordinates
1700031L13Rik	RIKEN cDNA 1700031L13 gene	1820 bp downstream