rs46805141 SNP Detail

Summary

• ID
  rs46805141
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:10974943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGGAAGTGGC ACAGATGTCT
  TTTCAAAGGG AAGCCCTGCA CTGGCTGGCA CCTGGAACAC AAGGCTAAGC AAGCCACCCC
  TCCTGTCACA CCACAGAGCA TCTGTGAAGC AGGAACAGGC ACCTGGTTTC CTTAGCACTC
  CACTCCACTG CGTGAAATGA ACAGTCAGCA CAAAGCAGTC TCTGGGTTGG GTTGGGTTGG
  R
  TTTTGAGACA AGAGTCTCAT TGATCCCAGG TAGGCCTTGA ACACAAATGC AGACAACGAT
  GACCTTGAAC TTCTAATTCT TCTTCACCTC ACCTCTCAGG TGCTGGAATT ACAACAGGCC
  ATTACTTTTT TTTTTTTTTT TTTTTTTATG CTGGAGATAA AATATAAGGC TTCCTGCATG
  CTAGCAAACA CTCTACCACC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss146010125	ENSMUSSNP2754088	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46805141					SNP	G	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:10974943 () rs orientation: forward

Symbol	Name	Function Class
Gm69307	predicted gene, 69307	within coordinates
Rr588838	regulatory region 588838	1202 bp distal
Rr588839	regulatory region 588839	1101 bp distal
Rr588840	regulatory region 588840	within coordinates
Rr588841	regulatory region 588841	461 bp proximal
Rr588842	regulatory region 588842	1219 bp proximal
Rr588843	regulatory region 588843	1801 bp proximal