rs46785132 SNP Detail

Summary

• ID
  rs46785132
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:115986101 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTT GGACCGCAGC TGCAGGCTTC
  Y
  GTCTCAAAAA GTTTAGCAGT TTCTT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss133574488	ENSMUSSNP5469305	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
ss321917111	CHEV_6_115959158	CHEVERUD	SCREENING_POP	f	SNP			T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46785132					SNP	T	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:115986101 () rs orientation: forward

Symbol	Name	Function Class
Gm53336	predicted gene, 53336	within coordinates
Rr637132	regulatory region 637132	1696 bp distal
Rr637133	regulatory region 637133	843 bp distal
Rr637134	regulatory region 637134	199 bp proximal
Rr637135	regulatory region 637135	750 bp proximal
Rr637136	regulatory region 637136	1310 bp proximal
Rr637137	regulatory region 637137	1585 bp proximal