rs46763316 SNP Detail

Summary

• ID
  rs46763316
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135623558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCCCCATTA GTTGACAGTC
  CACCTCCAAG CAGCAGACAG GACGGTTTGC AGGGGTGAAG CAGGAGGGAG GGATGGAGTG
  TTGGAACGTC AGGGGAGGGT CTAATGACCC CACACACAGG GACTGGTACA GGCACGATTT
  TTTGAAGGCC TCCTGTAGAT AATCGAAGCT GTTGGAAAGA AAGGGCCACA CAAGCCCAGG
  R
  AACAGAATTC CACGCCACAC AGATCTTCTC TGTGGGTTGG GCTCTGCTCC AAGGCCCTTT
  CAAGGTTTCC TTTATTGGCT GCTCACAAGT CAACCTCTGT GGTTAAATGC TACCCTACCC
  CACACTCGGC AGAGGGAGGC TGCGTGCTAC TCCCCTGAAG TCCCAGGGGC ATCTCTTGAG
  AATATTGGCT TGAATATGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147553256	ENSMUSSNP1092044	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46763316					SNP	A	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135623558 () rs orientation: forward

Symbol	Name	Function Class
Cnr2	cannabinoid receptor 2	Intron
Rr602183	regulatory region 602183	843 bp distal
Rr602184	regulatory region 602184	549 bp distal
Rr602185	regulatory region 602185	within coordinates
Rr602186	regulatory region 602186	625 bp proximal
Rr602187	regulatory region 602187	748 bp proximal
Rr602188	regulatory region 602188	776 bp proximal
Tssr39650	transcription start site region 39650	1052 bp downstream
Tssr39651	transcription start site region 39651	851 bp downstream
Tssr39652	transcription start site region 39652	771 bp downstream