rs46760460 SNP Detail

Summary

• ID
  rs46760460
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:131900078 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A AGGGTCACTG AGCAGTATTT GCGGTTCTTG TTTCTCTATG
  GCAAAGGCAG GTGACAAAGC TCAAGACCTG GGCTACACTG AGGCCTTGTT CTTCCTCTTA
  G
  AACTGCTTGT GCATCTAACA AGCCTAACAG ACAGCACATA CCTGGGATGG TGTTGTCCAA
  AATGAAAGCC ACACAGCCTC CTACAAACAT AGCGGTGGTG A                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss147616246	ENSMUSSNP5545819	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46760460					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:131900078 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr565386	regulatory region 565386			164 bp distal
Rr565387	regulatory region 565387			1961 bp proximal
Slc23a2	solute carrier family 23 (nucleobase transporters), member 2			Intron
				Noncoding-Transcript-Variant