rs46759148 SNP Detail

Summary

• ID
  rs46759148
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:101567939 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCATGTAGA TCAACACCCG
  ACAACAGATA GAAGAGGCAG AGGCCAAATT CAACAGATGT CCAGAGGTCA GAGTCTTTGC
  TCATACTGAG CCTGCCTTCT TCTCCCTCCC ATGGTCCCCT GCTTGGAAGT TAGATGTGAA
  AACAAATTAA ACAAAACAAA ATAAAACAGA AATTAAGAAC TGGAATGCTT TAACAGTTTC
  Y
  ATCGTTTGGT AAACTGATAT CACTGAAAAA AAATGGAGCC ACAATATATG ACTTGTATTT
  ATATGGCTTG AAATTCTAAT TCTTTGTCTC ATTACTGCTC ACACATCAGA GGGCTTGGCT
  GCCCTTTAGC TATAGCTCAC AACCATACCT GCAGCTGGCC CTTGTGTCAA TCATAAATTG
  TCTTCAGGAC CTCCACATAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	MSM/Ms
ss147125507	ENSMUSSNP1522377	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	MSM/Ms
rs46759148					SNP	T	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:101567939 () rs orientation: forward

Symbol	Name	Function Class
Rr376927	regulatory region 376927	973 bp downstream
Rr596204	regulatory region 596204	65 bp distal