rs46756332 SNP Detail

Summary

• ID
  rs46756332
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:127645439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGATACTTC ACCACAGTTT
  TACCTTCTAT CTTTACAGGA CAACTTGATT AACCCCCTTC CCACAGCTAG ACTGTAAACA
  ATGCAGAACC ATGCTATTCT TGCTTATTAT TCTAACAGTA CATTAGTGCC CCACACTTGC
  TCATGAAGGC TGATTGTGTT TAGAATGAAG CAAGACTAGA AACATCTTTG AGATAATGTC
  K
  TAAAGGCCTT CACTACTGTG ATGGTCTGTA TATGTTTGGT CCAGTGAATG GCACTATTAA
  GTGTGGCCTT GTTGGAGAAG GGTGTATCAC TGTGGGCGTG GGCTTTAATA CCCTCATCAT
  AGCTGCCTGG AAGCTAATCT TCTCCAGATG AAGATGTAGA ACTCTCAGCT CCTCCTGCAC
  CATATCTGCT TGGATGCTGC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
ss135873092	ENSMUSSNP5634491	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	T
ss320957499	CHEV_3_127554708	CHEVERUD	SCREENING_POP	f	SNP				T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	LG/J	SM/J
rs46756332					SNP	G	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:127645439 () rs orientation: forward

Symbol	Name	Function Class
Rr584881	regulatory region 584881	1316 bp distal
Rr584882	regulatory region 584882	1351 bp distal
Rr584883	regulatory region 584883	within coordinates
Rr584884	regulatory region 584884	977 bp proximal
Rr584885	regulatory region 584885	1614 bp proximal
Rr584886	regulatory region 584886	1722 bp proximal