rs46754510 SNP Detail

Summary

• ID
  rs46754510
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117863182 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCTGTCCTC TTCTTCACTC
  TGAAGCTAGC TGGCAGAGGA AGGAGCTAAA TATCGCCGTT TTATGGAACT GTGAGGATTA
  AGGCAATGTT TTTGAGACGA AAGTTAATCT ACTTTGGTTT TTCTCCCATT TCCCACCATC
  TCTCTGAGGT GGGAATGAGT TACTGTATGG AAAATGTACT CATGTCATTG TGCTCTGGTA
  K
  TATTCTTAGT TTTCATTATG CCCTAATTTA TTCAACTTTA ACTACATCAT TCTATTTTTT
  CCAAGCATCT ATGATTCTAC AAACAAACAA ACAAACAAAC AAACAAATAA ACCAAACAAA
  CCAGTAAAAA CAAAAATAAC ATTTGGACAA CCTGTGTTTG TCTGGTTCTG CCTGTATACC
  CAAATAAATG TGTGTGTGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	LG/J	SM/J
ss135695985	ENSMUSSNP3565956	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	T
ss320900841	CHEV_3_117772451	CHEVERUD	SCREENING_POP	f	SNP			T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	LG/J	SM/J
rs46754510					SNP	G	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117863182 () rs orientation: forward

Symbol	Name	Function Class
Gm65635	predicted gene, 65635	within coordinates
Rr583881	regulatory region 583881	625 bp proximal
Rr583882	regulatory region 583882	899 bp proximal