rs46741639 SNP Detail

Summary

• ID
  rs46741639
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7730694 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACCAATACTC AAAACAAAGC
  AAAGACAGTC TGTGGGGTAG CCAACATCAA GCCTATTTTC TGTGGGTCAT GCAGTCAGAG
  GTTAGGTCTT TTGGAGGACA GAAGTGGAGT TGACAGCAAG GTCAAGATTT ACAAAGAATT
  CCAAGTGTGA TCTAAGACAG CTTCCTTAAA GTAGAAAGGA AGGGTTATGG TTGGGCAAGG
  S
  TCATGAGGGA GAGGCAGGAT TGGTGGAAAC ACCACAGTGA GGGGTTGAGG CAAGAGATTA
  AAATGATCTT AGATGCAATT TGCCTTTAGA TGTTTTCTAA AGATGAGCTG TGCTACTTTC
  CTATGGTTGC TGTGTCAGCA CAGCACAAAC TGTGACTTAC ACGCAGAAAG AAAAGAAAAC
  GATTAAACTT ATTGGATCAG                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	MSM/Ms
ss132954048	ENSMUSSNP2929173	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C	G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	MSM/Ms
rs46741639					SNP	C	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7730694 () rs orientation: forward

Symbol	Name	Function Class
Rr626314	regulatory region 626314	1478 bp proximal