rs46734089 SNP Detail

Summary

• ID
  rs46734089
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:129816228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGGAGGA TACCTGGAGC TTGCTGGTCA GTGAGTCTAG
  CTGAATCGGG GAGCGCCAGT GTCAGTGGGA GACCCTGTCT CCGGGAGTAA GGTGGAGAGT
  A
  ACCGAGGAAG ACACTGGAGT CCTCTCAGGA TCCCACACAC ACTCAGATCC ATGCGGATGC
  ACAGAGGATC TTGAACATAG GACACAGTCA TGTCTGCAC                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147454272	ENSMUSSNP463135	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46734089					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:129816228 () rs orientation: forward

Symbol	Name	Function Class
Rr600382	regulatory region 600382	944 bp distal
Rr600383	regulatory region 600383	1104 bp proximal
Rr600384	regulatory region 600384	1727 bp proximal