rs46731847 SNP Detail

Summary

• ID
  rs46731847
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127151567 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TATTTTTATT GCTTACTTCA CATCTAATTT TGCTACTGTT
  ATGAGTTGTA AATGTCTTTT GTTTTCCAAA AGTCTTTGAC AACCCCAAAA GGGGTCAAGA
  Y
  CCACAGTTGA GAATCACTAC TCTAAATTCT GAGCATTCAT CAACCCATTC TGATGCCTCC
  TACGAGGGCA GCAGGAAGAG CAGAAGTGGG AGGCAACCA                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147525490	ENSMUSSNP2648821	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46731847					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127151567 () rs orientation: forward

Symbol	Name	Function Class
Gm54150	predicted gene, 54150	within coordinates
Rr397283	regulatory region 397283	555 bp downstream
Rr397284	regulatory region 397284	1087 bp upstream
Rr564490	regulatory region 564490	567 bp distal
Rr564491	regulatory region 564491	779 bp distal
Rr564492	regulatory region 564492	688 bp proximal
Rr564493	regulatory region 564493	1729 bp proximal