rs46724396 SNP Detail

Summary

• ID
  rs46724396
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17943382 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACTTGGTAG CTGGGATACT
  GTTCAGTGGT AGAGTACTTA CTTGCCTTGC ATGGGGCCCT GGTTTCTGTG TGCCCAACAT
  TACAAAAACA AACGAATAAA CAACTGAGAG AGGAAAGGAT GTAAATAGAG TCACAAAAGC
  ACTAGCCCCA AACAGAGTGT GCGCACATGC CAAACAGACA CAGGGAAGTC AGGTTTTCAA
  K
  GTGGGTTTAA GCTCCATTGA AACACACATC TGTGCCTCAG TAGGTTGTTA TAGCTTTGTG
  GACAAGAAGC CACAGACCAG CAGTCTGTCC CAGAACCTGG CTGCTTACAC CCTTGTTGCC
  GTCTCAAACA CTTCATCCAA GAGTACCTTT TAAGCTTTCT CATGTTTGCA TTTCTGACAC
  TTTAATCTGA GCATTCTTTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss133025436	ENSMUSSNP2155877	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	G	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46724396					SNP	T	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17943382 () rs orientation: forward

Symbol	Name	Function Class
Rr626887	regulatory region 626887	415 bp proximal
St7	suppression of tumorigenicity 7	360 bp downstream