rs46711194 SNP Detail

Summary

• ID
  rs46711194
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:149333719 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CATTT AAAGCTCTGA GGCTAGAAGG
  S
  TGCCCCTGTG CCTTGATGAC ATCAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss144701028	ENSMUSSNP1934688	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46711194					SNP	C	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:149333719 () rs orientation: forward

Symbol	Name	Function Class
Cpgi17095	CpG island 17095	1352 bp proximal
Gm20488	predicted gene 20488	within coordinates
Medag	mesenteric estrogen dependent adipogenesis	1495 bp upstream
Rr625496	regulatory region 625496	1005 bp proximal
Tssr49905	transcription start site region 49905	1537 bp upstream
Tssr49906	transcription start site region 49906	1844 bp upstream