rs46710456 SNP Detail

Summary

• ID
  rs46710456
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:135002439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G AACTGTGAAC AGATTAAAGT CCCCTCACAG TATAGCCTTT
  CCACCGTGAT CCCAAATGGT AAATTCAAAC AGACACACAC TTAAAATGGC CCAGCAGAGC
  C
  TCAAAAGACT CCACATTGGC CCCAAGACTA CTGGGTCCCA GTTAGGATTT ATCCAAGTCA
  TTTTGGGTCC CCAAATTACT CCCTCACATG TATCTGTGCT G                    
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J
ss147543379	ENSMUSSNP4275897	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J
rs46710456					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135002439 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15068	CpG island 15068	1505 bp distal
Rr398589	regulatory region 398589	1937 bp downstream
Rr601980	regulatory region 601980	1824 bp distal
Rr601981	regulatory region 601981	1999 bp distal
Rr601982	regulatory region 601982	within coordinates
Rr601983	regulatory region 601983	1686 bp proximal