CATGCCTCGT GAAACAGGGC TGACTTGGAA AAGCGAGTGG CCTCTGGAAC AGGATGGGCT TTTATCACAC ATCCCAATTC GGGTCCTTAA GGTCCTGTAG CAACTTGGCC CATGACTACA AAGGGCAGAA CCAGGAAGAG GTGTAGAAAG GCCCTGAGGG TTCTGGGAAT TCCGGAATGG GCTGAGGACA CCTTTCTGCC Y TGGTACTTCT CCCAGGACCC CCTGTCATTG TGGTGCCCCC CAGCAACAGT ACAGTCAACT CCTCTCAGGA TGTTTCCTTG GCCTGCCGGG CTGAGGCATA CCCTGCTAAC CTCACCTACA GCTGGTTCCA GGATGGTGTC AATGTCTTCC ATATCAGGTA GGGCAACCTA TCTCTTGGGT AGTGGAGGCA GGGGATTGAT Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129X1/SvJ |
A/J |
DBA/2J |
---|---|---|---|---|---|---|---|---|
ss146193665 | ENSMUSSNP7203926 | ENSEMBL | ENSEMBL_Sanger | f | SNP | T | C | T |
SNP Consensus Information | ||||||||
SNP | Consensus Type | 129X1/SvJ |
A/J |
DBA/2J |
||||
rs46705329 | SNP | T | C | T |
Location: Chr1:172319166 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Cpgi1051 | CpG island 1051 | 894 bp distal | ||||||
Igsf9 | immunoglobulin superfamily, member 9 | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr423588 | regulatory region 423588 | 1891 bp distal | ||||||
Rr423589 | regulatory region 423589 | 1011 bp distal | ||||||
Rr423590 | regulatory region 423590 | 832 bp distal | ||||||
Tssr10205 | transcription start site region 10205 | 581 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/25/2025 MGI 6.24 |
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