rs46681175 SNP Detail

Summary

• ID
  rs46681175
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:106103673 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGAGG GGAATGCCAG GGCCAAGAAG
  Y
  GGGAGTGGGT GGGTAGGGGA GCAGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	LG/J	SM/J
ss147165529	ENSMUSSNP7152839	ENSEMBL	ENSEMBL_Sanger	f	SNP	C
ss321245719	CHEV_4_105919081	CHEVERUD	SCREENING_POP	f	SNP		C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	LG/J	SM/J
rs46681175					SNP	C	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:106103673 () rs orientation: forward

Symbol	Name	Function Class
Gm12724	predicted gene 12724	within coordinates
Gm12729	predicted gene 12729	within coordinates
Rr596712	regulatory region 596712	413 bp proximal
Rr596713	regulatory region 596713	1396 bp proximal