rs46649565 SNP Detail

Summary

• ID
  rs46649565
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:169201640 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TTGAG TGCTGATAGA CAGACAGGCC
  T
  CCCTTTGGGG GGAATTTACA GTTTA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	LG/J	SM/J
ss148282920	ENSMUSSNP1734952	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T
ss320612360	CHEV_2_169185220	CHEVERUD	SCREENING_POP	f	SNP			T	T
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	LG/J	SM/J
rs46649565					SNP	T	T	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:169201640 () rs orientation: forward

Symbol	Name	Function Class
Gm75475	predicted gene, 75475	within coordinates
Rr571188	regulatory region 571188	1928 bp distal
Rr571189	regulatory region 571189	594 bp proximal
Rr571190	regulatory region 571190	742 bp proximal