rs46648387 SNP Detail

Summary

• ID
  rs46648387
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8241270 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATCTGGCAC AGGTTCTTAG
  GATCATTTGG GACAGGCACT CATAGGTTCT TAACCTCATG GGTGAATGAT AATTTTAAGT
  TTGCTATTAC TTTTGCCTTC AGGAAGTATT ATGTGAAATG TATGATTATT TTTCCATTAG
  GACCTCGAGA TTAAAACTAT CATCCAGATA AAACATCCTC TCAGGAAAGA ACGGTTCCCC
  S
  ACAAATGCTT TATTACTTTT AGCTTGTCTA TTCTACTGTT CTTCATTTGG AGTCCATTCC
  CAGTATGTGA AACTTTGAGA TTTCTAATAT CCTTTTGAGT GTATATGCTA GACTTTGAAT
  ATTTTATTTC CTGCAGAGAC ATTTGAACAG AGTGAAAATG AACTCGCATA GAACAAAATT
  GCCAAGCATA TGTGACGGAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss132964757	ENSMUSSNP2002381	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	C	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46648387					SNP	G	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8241270 () rs orientation: forward

Symbol	Name	Function Class
Rr626362	regulatory region 626362	274 bp distal