rs46647648 SNP Detail

Summary

• ID
  rs46647648
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:136867889 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGAAGAAA GGGGACCAGG
  TGCAGCAGCC AGGAGGTCCA AGAGAGAGCA GTCGGTAGGA CCAAGTTGGA TTATATCGGG
  AAGGGCAGCT CGTCCCCTGA ACTGGAGTGT AGGGTAGTGG GTGAGGTATG CCAGCCATAC
  TGTCACAGGT GAGGGATACA GGGAGGACCT GGGAGAGTCA CTGGTCCTCC CTGCTGCTCC
  M
  TGAACACAGT GAAAGATGTG CCCACGGGAA TAGAAGGTCC TGATGGTGTC CGACAGGTGG
  GGATGCCTTA ACCTAAGCCA CAGAGAGGCT TCTCCATCCT CCCTCCCTGG GGGCTCACAG
  AAGAGGAAGT CATCAGGGAA CCAAGTTCCT GGACGTCCAG ATGTTTCTTT GTAGCTCAGC
  TGCACCAAGC AAATGCCACC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J
ss147595839	ENSMUSSNP2661050	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J
rs46647648					SNP	C	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:136867889 () rs orientation: forward

Symbol	Name	Function Class
Gm31762	predicted gene, 31762	within coordinates
Rr602553	regulatory region 602553	1630 bp proximal
Rr602554	regulatory region 602554	1889 bp proximal