rs46646815 SNP Detail

Summary

• ID
  rs46646815
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:142983771 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATGTAAATT TCAGTGGATT
  TATAATAATC AAGGTGAGAT GGGAAGACAT AGAAAGAAAA GAAAAAATGA AGGGAAAAAG
  AAAAACAGCA ACTCAGAAGA AAAAAAAAAG TATTAATCAT GTCACCCGAG GGTAGCCAGA
  ACATCAAATC CTGACTTGAT AATTAAAGGG AATAAATGAA AGAAGACCCC TCCTGTTCCA
  Y
  GGGAACCGTA ATTGCCATTG TTGAATATTC CTATTGGACA GGGAAAGCCT GACGTCACAG
  GCAAATCCCA TCTGACAGAG CTGTAAGAGA AACAAAAGCA TTTCCTCAGA TTAGGCTGAC
  GCAGAGCTAT ATAGTAACAG TAAAAATAAT GATAAATAAT AATAATGATA ACACAACAGC
  AACAAAATAA CCAGTTAATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	DBA/2J
ss147777702	ENSMUSSNP612738	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	DBA/2J
rs46646815					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:142983771 () rs orientation: forward

Symbol	Name	Function Class
Rr604180	regulatory region 604180	1270 bp proximal
Rr604181	regulatory region 604181	1578 bp proximal