rs46633456 SNP Detail

Summary

• ID
  rs46633456
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:55682429 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATGGAATA GGTGCCAGGA
  TTAGTGCAGA GAGAATAGTG ACCCATACTT AAATCTTCGT GTGTTTCTCC TTCCCTCCTT
  TTCCTTCTCA ACAAAAAATT CCATTTTAAT TCCCCGTGCT TCTTCTTTTC TAGTGTGCCT
  AAGAGTTGAC GTTTGAGGAT TAAAATAAAA TAACTGGATG GCTCATGCCT GCAACCCTAG
  Y
  ACTTGAAAGG CAGAAGGAGA AAAATTATGA GTCTGAGGCC AGCCTGGGCT AACATAGCAA
  TACCTTACTT CTACCCACCT CCTCAAATCA AGGAAAAAAC TGTTGTGATT ACAGTTGAGT
  ACTTTGCTTT CAAGCCCTGG CTTGTCCACT TCCTGGTTCT ATTACACTGG GAGTTTCTTT
  GCCTGAAAAC CCAGGAACAA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J
ss133214618	ENSMUSSNP352707	ENSEMBL	ENSEMBL_Sanger	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J
rs46633456					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:55682429 () rs orientation: forward

Symbol	Name	Function Class
Rr406317	regulatory region 406317	647 bp distal
Rr631016	regulatory region 631016	1050 bp distal