rs46621606 SNP Detail

Summary

• ID
  rs46621606
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:37841559 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTTGGCCC TGGTGTTCCC
  CTGTACTGGG GCATATAAAG TTTGCGTGTC CAATGGGCCT CTCTTTCCAG TGATGGCTGA
  AAACTCTTCC TTTCTTAAGT TGCTTTTGGT CACAGTGTTT TGTCCCAAAA ACAGAAAAGT
  TGCTACTGCA GTGAGAAAAG CAAAGTCACT GTTAGCAGGA GCTATAGCAA ATAGTGGTAT
  A
  ATTTCTCGGG AGACATGGGT AATAGAGCCG AGACCCGATC CTGTCACCCT GAGACCTGAT
  TCTGTCACTC AGAGATCTGA TCTTGTTACC CTGAGACCTG TTTCTGTCAT CCCGAGACTG
  CCCCTCTCAC CCTGAGATCT GTCCTGTCAC CTTGAGACTG CCCCTGTCAC TCTAAGATCT
  GTCCCTGTCA CCCTGAGACT                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss134813965	ENSMUSSNP3889023	ENSEMBL	ENSEMBL_Sanger	f	SNP	A
SNP Consensus Information
SNP					Consensus Type	A/J
rs46621606					SNP	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:37841559 () rs orientation: forward

Symbol	Name	Function Class
Rr575564	regulatory region 575564	289 bp distal
Rr575565	regulatory region 575565	941 bp proximal
Rr575566	regulatory region 575566	1912 bp proximal