rs46618252 SNP Detail

Summary

• ID
  rs46618252
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:147511072 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      G TCTTTAGTGG CTCGGCCATC TCTTCGGCTC CAAAGCTCTA
  ATTCCTATAA TTAAAATGAA AACAGGAGAA AGTGGACAAA CTGGCCTTCA CCTTGATGGT
  G
  GGGAAACCCT CTCCTCTTTA CTCCACCTCC CTAACTATCT TTACTGCACA CTTCATGTTT
  CCCTTTGATA TAATGAGACA ATGTTTCAAA TAAGAGAATT G                    
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J
ss147959087	ENSMUSSNP5851625	ENSEMBL	ENSEMBL_Sanger	f	SNP	G
SNP Consensus Information
SNP					Consensus Type	A/J
rs46618252					SNP	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:147511072 () rs orientation: forward

Symbol	Name	Function Class
Rr398813	regulatory region 398813	1246 bp upstream
Rr604485	regulatory region 604485	396 bp distal
Rr604486	regulatory region 604486	482 bp distal