rs46614123 SNP Detail

Summary

• ID
  rs46614123
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:129896024 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGGTCTCA GAGGCTACCA
  CCCATGTGCC ACTGGATGAT GATGCTATGA GGGTTTTTGC TCGCTTGCTT GCTTGTTTTG
  GGTTTTTGTA CATACCCATA GCATCTGTGT ATCTACATCC AGAACCGAAT CATGAAATGC
  CCCAGAAGAT GCAGTAAAGA GAAAGTGACT GGAGGGATGG CTCAGCCACT AAGAGCACTT
  K
  TTGCTTTTGT AGAGGACCCA GGTTTGATTC CCAGGATCCA CATGGCAGTT CACAACTACC
  TGTCACACTA GATGCATCCA GGATATCCGA TGGCCTCTCT TGGCCTCCCT CGGCACTGTG
  CAGATGCAAT GCACAGACAT GCATGCAGGC AAGAATAGTT ATACATATAT AAAGGGATAA
  ATAATATTTT AAAATAAAAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss135891744	ENSMUSSNP2668265	ENSEMBL	ENSEMBL_Sanger	f	SNP	T	T	T	G
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46614123					SNP	T	T	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:129896024 () rs orientation: forward

Symbol	Name	Function Class
Rr585133	regulatory region 585133	983 bp proximal
Rr585134	regulatory region 585134	1214 bp proximal
Rr585135	regulatory region 585135	1300 bp proximal