rs46597466 SNP Detail

Summary

• ID
  rs46597466
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:67336210 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCTGTTAGGC TGTAGTTTCC TTTGAGGGGT CAGGGAGCTT
  TTTCTGTGTG GTAGGATGGG GAAGGAGGGC ACATAGGGTT TTGTAGCTGG GGGGTGTGTG
  T
  GGGGGGGGTG TGTCGGGGGG TGATGAGCAC GGGTTCCAGC CTAACAACAC TAAAGTAAGG
  AGATCATTTT CTGCGGAGAG GGAATATGGT CTGGCTTGA                       
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	DBA/2J
ss135257629	ENSMUSSNP7165045	ENSEMBL	ENSEMBL_Sanger	f	SNP	T
SNP Consensus Information
SNP					Consensus Type	DBA/2J
rs46597466					SNP	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:67336210 () rs orientation: forward

Symbol	Name	Function Class
Cpgi13245	CpG island 13245	1069 bp proximal
Gfm1	G elongation factor, mitochondrial 1	1238 bp upstream
Rr577916	regulatory region 577916	613 bp proximal
Rr577917	regulatory region 577917	729 bp proximal
Rr577918	regulatory region 577918	1150 bp proximal
Tssr29439	transcription start site region 29439	1224 bp upstream