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rs46583944 SNP Detail
Summary
  • ID
    rs46583944
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr2:129081306 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                          ATCTGGCTGT TCTAGATATC TGTAAGCCAG TCTCATGTGT
    GAAGAGGATT TCTCTCAGTT TTGATAGATG CTGTCAAGTT GCCTTCCGGA AGGGGCTGTG
    M
    CAATTTACAC TTCTACAATA GGAAGGCCCA CCTCCTCATG TATCACCAGA GTGTGTTTTC
    TACTCGATGA CTTCTCCCCA ATCTCATAGG TGAAAATTG                       
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129X1/SvJ
A/J
DBA/2J
ss147583991 ENSMUSSNP153799 ENSEMBL ENSEMBL_Sanger f SNP C C A
SNP Consensus Information
SNP Consensus Type
129X1/SvJ
A/J
DBA/2J
rs46583944 SNP C C A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr2:129081306 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Rr564886 regulatory region 564886 14 bp distal
Rr564887 regulatory region 564887 1389 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/25/2025
MGI 6.24
The Jackson Laboratory