rs46582380 SNP Detail

Summary

• ID
  rs46582380
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:164035816 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGATGTGTAT TGTTCCCAAA GGGCCTGTTC TAGGAAAAAT
  CAAGAATTCA ACTTTGCTGA TATATCCGCC TAGGCAGCCC AGTAGCTCTA CAGGGAATTG
  R
  CAGGGAATAA ATAACTTTAT CTTATGACCT TGTAATTATT TCCCAAATTC CGTTTATCTT
  ACCTACATTG ACTCACACGC AAAACCTCCA ACAAGATTC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss145974623	ENSMUSSNP3539489	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46582380					SNP	G	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:164035816 () rs orientation: forward

Symbol	Name	Function Class
F5	coagulation factor V	Intron
Rr422161	regulatory region 422161	245 bp proximal