rs46573475 SNP Detail

Summary

• ID
  rs46573475
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  127
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:107600386 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      A CCCAGTGCTA AATGCTTAAT CCTCACAAAA ACTTCATGAG
  GAGCAGACTG AGAGATCATG GCTCAGAGAA ACGAGTTCAT TATGTTCAAG GTCTCACACA
  S
  CGAGCTGGTG ACATCGCTGG GACTCTATCT GCAACCGCTT CTTGCAGGTG TCAACTCTTC
  TCTGATTTGT TGGTCTAACA GATGCTTATC CAGCCTTCTT T                    
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
ss147182574	ENSMUSSNP879288	ENSEMBL	ENSEMBL_Sanger	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	DBA/2J	MSM/Ms
rs46573475					SNP	G	G	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:107600386 () rs orientation: forward

Symbol	Name	Function Class
1700047F07Rik	RIKEN cDNA 1700047F07 gene	within coordinates
Rr597057	regulatory region 597057	1785 bp distal
Rr597058	regulatory region 597058	1919 bp proximal